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Similarly, we found a large number of relevant transcription factor binding sites within each opsin's proximal promoter, and identified five opsins that were considerably divergent in both expression and the number of transcription factor binding sites shared between O. niloticus and M. zebra.
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This indicates that H. m. duboulayi is considerably divergent from the other two subspecies, as is the congeneric H. penelope which differs from the most common H. m. merope and H. m. salazar haplotype at 34 35 sites.
Avipoxviruses are considerably divergent from other ChPVs [ 9, 11] and may constitute a separate subfamily within the Poxviridae family [ 11- 13].
However, since the Oikopleura genome is considerably divergent from those of other tunicates, it seems reasonable to assume that other genes might fill the roles played by the non-conserved genes.
Australian nests were considerably more divergent from CT, CS, II, SA and SH [average FST = 0.378 0.523 (Table 2)].
Each repeat at a similar position in LRP5 and LRP6 is highly conserved, whereas the different repeats within the same protein are considerably more divergent.
P450s in the fungi studied here are considerably more divergent.
It should be noted however, that compared to the almost 95% identity between vertebrate dystroglycan cytoplasmic regions, Drosophila dystroglycan is considerably more divergent [ 43].
The overall similarity of LCB placement among the genomes suggested that one or more genomes might be considerably more divergent from RH4 than the majority.
The Kiambu5 isolate is considerably more divergent, with close to 40,000 SNPs relative to Muguga, including >8,500 non-synonymous mutations distributed among >1,700 (42.5 %) of the predicted genes.
The nine precursors from Pseudomonas are considerably more divergent, only sharing the Gly-rich cyclized region with the E. coli precursors (Fig. 4 and Additional file 8: Table S2).
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