Exact(23)
We predict the new protein gnew to have the folowing weighted interaction profile: (4) where y g is an interaction profile vector, s g is a sequence similarity score and z g new is a normalization term defined as.
A seed set of edges is first identified from the weighted interaction network, where the weights are based on the degree of conservation and other complementary measures.
Then, for a weighted interaction network G = (V, E, s, t, c), the size is denoted as n = |V| and m = |E|.
To also take into account the information concerning the weighted interaction network, we introduce a new index, the weighted flow, inspired by previous work on generalized degree centrality in social networks [66].
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In view of this, in the current study we are to adopt a weighted interaction network instead of binary one.
Similar(37)
Although individual edge weights may be unreliable, deviations will average out when many weighted interactions are combined (Nepusz et al., 2012).
The sum is the molal weighted interactions of all the components in the solution.
In our approach, the sum of distance-weighted congruent objectives of normalized weighted closeness relationships and distance-weighted normalized weighted interactions are handled in the objective function.
We contribute to filling this gap by presenting a new graph filtering and visualization tool called fastviz fastviz that processes a chronological sequence of weighted interactions between the graph nodes and dynamically filters the most relevant parts of the network to visualize.
For STRING (Jensen et al., 2009), we use all weighted interactions.
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