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Within each well, the minimum molecular weight of a sequence was 4567 daltons, and the maximum weight was 8949.9 daltons (Additional File 1).
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The strongly unimodal sequence of weight n is a sequence just with the condition (2) in Definition 1.1 replaced by: (2)′: For some j, we have (0 < d_{1}< cdots< d_{j-1}< d_{j}> d_{j+1}> cdots> d_{m}> 0).
A position weight matrix represents a sequence motif characteristic of a collection of related DNA sequences.
For weighted sequences, n seq needs to be replaced by the sum of the weights of all sequences that are included in F-value calculation.
Sequence alignments were divided in segments containing combinations of correlated polymorphisms and the association of segment sequences with placental parasite density was tested using Bonferroni corrected regression models, taking into consideration the weight of each sequence in the infection.
The ratio of hydrophobic/hydrophilic groups in the copolymer and the molecular weight of each sequence were varied in order to establish the influence of these parameters on the interactions between the components.
For each length of the clone length distribution, the weights of all sequences are summed up to receive the summarized weight wsum that is used to compute a sequence probability ps = ws/wsum.
AmyloidMutants sequence/structure landscapes were calculated permitting these four residues to mutate to Gln ('HET-s/4N→Q'), and the likelihood and corresponding energetic weight of each sequence within the ensemble was compared.
We have analyzed the molecular weight of these sequences as a function of isoelectric point and compared them with other fungal AQGP subgroups.
Since our sequences are, in general, very U-rich, we could only identify U-rich motifs through either the use of a prior specification or by reducing the weight of the input sequence set in determining the background model.
Based on their primary sequences, the calculated molecular weight of a trimeric complex of just one copy each of PP1γ2, Sds22, and PPP1R11 is ∼96 kDa.
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