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Such methods may fail to identify "weak" occurrences of the motif and often do not take into account the actual number of occurrences of the motif (for instance, in PRIMA, promoters are categorized to those having 0, 1, 2, or more than 2 occurrences of the motif).
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The weak occurrence of this haplotype in the Balkans might also result from human activity, as previously suggested for the rare presence of this variant in Poland [ 6].
On the contrary, the timing of autophagic activation relative to vehicle control varied among cells, and therefore the 86S-mediated autophagy was subsequently classified into steady (occurrence at both 24 and 48 h) and weak response (occurrence at 48 h only).
It is important to appreciate that although any single such interaction may be quite weak, repeated occurrence in a large molecule will tend to accumulate the effect.
This rarity in our dataset caused weak co-occurrence signals, and is probably the cause why neither of these families were assigned to the stable, high-ranking modules (see Additional file 2: Section 5; see Additional file 7: Figures S1 and S2 (heat maps visualizing the co-occurrences of GH6 and GH48 with the protein families of M1)).
This is also evident from a weaker co-occurrence of GH48 with the M5 protein families in lignocellulose degraders.
We may note that there are also cases of weak or delayed occurrence of SF that correspond to low values of the Vzp as indicated by the two horizontal bars centered around day 270 and day 298 (Figure 8). Figure 8 The local time versus day plot of ESF intensity, and the prereversal drift amplitude.
The hydrogen bond between N1 of DHNP and the backbone NH of Tyr53′ is weak, with an occurrence of only ~16%.
The pollen correlations have received weak corroboration from isolated occurrences of vertebrate taxa in marine strata in Europe which are also known from Otischalkian (pre-Adamanian) and Revueltian faunas outside of the park (e.g., [63], [64].
Given the apparently weak association between the occurrence of indigenous BSE and vCJD in some countries, we studied the occurrence of vCJD cases outside the UK in relation to the level of imported bovines and bovine products from the UK during the 1980s and the first half of the 1990s.
Redundancy of prediction methods has been used to explore the occurrence of weak homology protein motifs.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com