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Alignments were filtered with probcalc to eliminate weak matches (Pchance > 0.05), and short (<35 bp aligned, or < 32 matching bp) or ambiguous alignments removed with custom Perl scripts.
Splice sites with weak matches to the consensus sequences are common, though it is not clear how such sites are efficiently utilized.
Two weak matches to the IAN-1 domain were, however, identified in Hydra (see Additional file 4).
There are also a couple of weak matches (approximately 7.0 e-09) to a high mobility group protein B1.
Among those, only six (8.6%) had weak matches to PFAM domains (0.004 < e-value < 0.74) other than domains of unknown function.
No strong matches were found by threading programs for the complete segment, or for parts of it, but various beta-folds dominate among the weak matches.
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TripAdvisor has bEache the ubiquitous destination foroomtel revisws, and itheny be tough to match the scoredof the travel giant.
It's a weak match-up from the Darwinian perspective but I'm going to have to go with the idea that Jayhawks could at least peck you to death.
The E-values thus obtained were converted to scores between 0 and 1, with 0 representing a strong match and 1 representing a weak match.
As shown in the figure, it was more common to have a robust match against the INR PSPM and a weak match against FPR than the reverse.
AET-670 has a weak match to the PFAM UDPGT motif and is similar to proteins in the nonredundant (NR) database annotated as UDP-glucosyl transferase.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com