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We again used Manhattan distances and 9,999 iterations for these PERMANOVAs.
To assess ascertainment bias in our heterozygosity estimates, we again used the 1000 Genomes sequence data.
To stratify the patients we again used the MHC-I score quartiles determined in the respective data sets.
To test whether strategy-specific activity patterns in ×4 condition generalize to ×2 and ×6, we again used the cluster strength score, but now measured across conditions.
To better understand the defect in the encystation process, we again used CLEM to obtain high-resolution images of colonized amoebae.
We again used the 500 Kbps encoded foreman sequence, with and without partitioning.
Here we again used rules of a functional derivative described in Appendix.
To compute the fragmentation index, we again used 3×3×3 window.
For calculating 3D Green's functions, we again used the FEM with voxel meshes.
Concerning multinomial logistic regression analyses, we again used the 'no pain class' as our reference class (Table 2).
We again used constant comparison techniques and the relationship between second- and first-order themes (Glaser and Strauss 1967).
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