The genome of C. bombacis was predicted to encode for 8,048 proteins, out of which 576 are PSEP-encoding genes.
It was predicted to encode 5346 genes, with 5248 CDSs (98.17% of predicted genes).
TaARD was predicted to encode a 197 amino acid protein that belongs to the cupin superfamily.
Os11g05552, which was predicted to encode a signal recognition particle 54 kDa (SRP54) protein and act as a chloroplast precursor, had 18 bp nucleotides deletion in the coding region of ygl138 and led to a frameshift.
By sequencing, we found that, Os11g05552, which was predicted to encode a SRP54 protein and act as a chloroplast precursor, had 18 bp nucleotides deletion in the coding region of ygl138 and led to a frameshift.
In our study, Os11g05552, which was predicted to encode a SRP54 protein and act as a chloroplast precursor, was identified as the novel gene YGL138 t) leading to leaf-color mutation in rice.
Sequencing analysis revealed that, Os11g05552, which was predicted to encode a signal recognition particle 54 kDa (SRP54) protein and act as a chloroplast precursor, had 18 bp nucleotides deletion in the coding region of ygl138 and led to a frameshift.
BLAST search in the rice genome database revealed that YGL138 t) is a single-copy gene, and was predicted to encode a SRP54 protein and act as a chloroplast precursor.
The open reading frame (ORF) of TaZFHD1 was 1164 bp and was predicted to encode 387 amino-acid protein that contained putative zinc finger domain in the N-terminus and a DNA binding homeodomain in the C-terminus.
Our results showed that the full-length cDNA of AmphiCFH gene consists of 1295 bp nucleotides containing an 855 bp open reading frame (ORF) that was predicted to encode a 284 amino acid protein.
CDS Ccar_4289 was predicted to encode the replication protein of the plasmid.
