Part of CUFF.115357.1 was the same as the sequence previously named DFR3[ 28], but it was not annotated in the latest sorghum annotation (Sbi_79).
Notably, this locus was not annotated as a processed pseudogene in pseudogene-related annotation tracks at UCSC Genome Brower.
Because this protein entry does not contain any of the four annotation types used by Sma3s, pig Qil1 was not annotated by M1.
Iron as a metallic element, for example, was not annotated in CHEMDNER and SCAI, but is considered a drug (i.e., a vitamin) in the DDI corpus.
All the chemical annotations and predictions for both tasks were derived exclusively from the PubMed titles and abstracts; information from full text articles was not annotated for the CHEMDNER tasks.
However, in T. p. pertenue strains, gene TP0132 was not annotated (Table 3).
Among them, 43 encoded proteins with unknown function and 1 was not annotated.
110 encoded proteins with unknown function and 1 was not annotated (Table S1).
When a UTR was not annotated, its length was put to 0. For each graph, zero values of sequence length were discarded.
The TP0132 gene was not annotated in the T. p. pertenue genomes due to these relative deletions, which result in frameshifts and thus shorter predicted protein products.
Since the pvtrag33.5 gene was not annotated in the PlasmoDB sequence database at the time of initiating this work, we wanted to know if this gene was actively expressed by the parasite.
