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The model was initialised with boundary conditions from the USGS PRISM2 data set and a Pliocene atmospheric CO2 level of 400 ppmv and run for 300 simulated years.
To this purpose, the model was initialised with temperature and wind speed profiles from the meteorological soundings registered at Grand Junction station, located 300 km upwind of Boulder.
Each simulation was repeated 10 times (for a total of 10 ha) and was initialised with fallow land.
To check this, a second set of simulations was performed in which each organic water system was initialised with completely water-wet mineral surfaces.
Since only palatal screws were used, a certain bias might be introduced by the layout of the webpage because it was initialised with the occlusal view of the upper arch showing the palate.
The model was initialised with a single infected farm (Baylham Farm, near Ipswich) on 4 August 2007.
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All these modelling decisions are handled by the initialisation functions in VERTEX, which also allow models to be initialised with uniform spatial connectivity profiles, no synapse reduction, arbitrary delay times, and in a cylindrical shape rather than the cuboid of our slice model.
Simply put, models are initialised with random weights, and example inputs are fed through the network.
Simulations were initialised with the species occupying 20% of the landscape and run for 100 years.
The model is initialised with atmospheric, oceanic, and sea-ice observational data and current anthropogenic and natural forcings, so that the simulations are representative of current real world climate.
Weights for the system are initialised with pseudorandom numbers.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com