Exact(2)
A gene was assigned the function of its orthologs if it showed significant homology with expect value ≥1 × 10−7.
Based on KEGG annotations, the unique gene KP214_00701 in LCT-KP214 was assigned the function "Glycerolipid metabolism (ko00561)" [Figure 2C]; this gene contained 12 SNPs and 5 InDels.
Similar(58)
A framework investigating the dynamics of linguistic change and social coordination in virtue of which the word 'bachelor' has been assigned the function of expressing the lexical concept adult unmarried male would be an example of a foundational theory of word meaning.
The protein under consideration is assigned the function that had the highest χ value among functions of the corresponding n-neighbors [ 32].
This identification augmented the confusion in the field, as another gene, Rv0557, had already been assigned the function of PimB as an α- d-mannose-α(1→6 -phosphatidyl- myo-inositol-mannopyranosyltransferase (Schaeffer et al., 1→6 -phosphatidyl-
Alternatively, to better utilize global information, a physical interactome can be clustered first, and then a protein is assigned the functions that are found to be overrepresented in its clusters.
On average, 93% of classified proteins in a cluster were assigned the KEGG function which was the majority assignment in the cluster.
In particular, it was shown that if each source is assigned the utility function, then the corresponding rate allocation tends to the max-min rate allocation as.
(I_{{f(mathbf {x}_{i} -f(mathbf {x}_{i} -f}}phantomathbf {x}_{j} represents the case where two compounds with different ranks are assigned the same function value f(x).
Thus one chooses a target gene group of interest and uses "guilt by association" of one form or another to decide which other genes in the network should be assigned the same "function".
Out of 78 target genes with GO terms, 10 genes (13 %) were assigned the molecular function "kinase activity" (GO: 0016301).
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