Sentence examples for was aligned by from inspiring English sources

A dataset containing a concatenation of the 16S and 23S sequences was aligned by Muscle [ 80], and the alignment was manually edited to remove ambiguously aligned positions, giving a final dataset of 4195 nucleotide positions for phylogenetic analysis.

A set of predicted DtxR binding sites was aligned by means of the CLUSTAL X program [ 21], and the resulting alignment was used to create a HMM by using the HMMBUILD module.

Alleles from each gene were extracted and concatenated for each genome, the panel of concatenated sequences was aligned by using ClustalW software (31 ), and the core segments of the alignment were used for construction of a neighbor-joining phylogenetic tree by using MEGA software.

The timing of the initial arrivals was aligned by sight.

The resultant spectral signal was measured by a portable spectrophotometer, where the sensor was aligned by a custom-designed micro-positioner.

Each dataset was aligned by Muscle [38] first and further adjusted manually in Bioedit [39].

The primary sequences of AAT-EC and HDC-MM were aligned by automated alignment procedure.

Aligning step: The 1046 groups were aligned by Muscle, a multiple alignment program [ 23].

The gel images were aligned by automated calculation of alignment vectors.

Sequences were aligned by WebPrank[ 44], and the alignment was trimmed at each end.

Sequences were aligned by using CLUSTAL W [ 127] with default multiple alignment parameters.