The ChIP-on-chip signals were normalized with input DNA signals hybridized to the same arrays and the NLRs of the probes thus obtained were visualized on the Mouse NCBI37/mm9 Assembly in the UCSC genome browser [ 43].
In this study, 82% of posteromedial compartments were visualized on the first attempt, and 3% were not visualized.
I think he's reached a point now where he thinks electronically, so he can visualize on the screen as fast as most of us can visualize on paper".
On top of this, they have built an HTML5-based software application for visualizing the data stored on the array.
To visualize the array data, we calculated a fold change ratio for every array position based on its normalized average intensity in each treatment (i.e., JH, SHE, LS, LR) divided by its normalized average intensity in the control (acetone) treatment.
While no dislocations could be observed on the hexagonal array covering the cylindrical part, six wedge disclinations could be visualized on each hemispherical cap.
The resulting PCR products were visualized on agarose gel.
The modification of proteins on the array was visualized using streptavidin-AlexaFluor® 647.
The Gene Array demonstrated high reproducibility in exon expression levels and detected the same splicing events as the Exon Array, as seen by their overall similar fold change pattern when visualized on a plot.
Each PCR product was visualized on an agarose gel and analyzed for quality and quantity as previously described [ 17] or by spectrophotometric methods as described in The GeneChip® CustomSeq® Resquencing Array Protocol Version 2.0.
