Sentence examples for visualisation was done from inspiring English sources
Network visualisation was done with Cytoscape 1.5.2 [32].
Visualisation was done in R/Bioconductor and Inkscape version 0.46 [ 88].
Visualisation was done using a Fastred chromogen system (DAKO, Hamburg, Germany).
Visualisation was done with an Agilent 2100 Bioanalyser and peaks with a concentration above 1 ng/μl were defined as positive (Assay properties set to "normal").
Visualisation was done by quenching of UV fluorescence or by staining the plates with potassium permanganate solution [KMnO4 (1.25 g), Na2CO3 (6.25 g), water (250 mL)].
Visualisation was done with a Agilent 2100 Bioanalyser and peaks with a concentration above 1 ng/μl were defined as positive (Agilent Assay properties: normal).
All numerical simulations were done with XPP [57] using the front-end package XPPy [58] in Python [59], and visualisations were done in Python using Matplotlib [60] and Mayavi [61].
Visualisations were done using Tablet [ 76] (version 1.13.07.31).
Visualisations were done using the Tablet software [ 16] and the Integrative Genomics Viewer (IGV) [ 35].
Final data analysis and visualisation of results was done with custom R scripts using the Bioconductor libraries [ 49] when possible.
Visualisation of the models was done using Pymol (http://pymol.sourceforge.net/).net/
