Sentence examples for viewing alignment from inspiring English sources

Other options in the HTML output include viewing alignment, viewing Position Specific Probability Matrix (PSPM), and finding replications that are similar to the best motif found [ 5].

Bioedit [76] for viewing alignments.

Furthermore, there are restrictions on the number of sequences that can be usefully considered in generating a multiple sequence alignment, in part due to the practical limitations of viewing alignments of hundreds of sequences.

Intron-exon boundary refinements and UTR additions were performed by annotators viewing alignments generated by the Eukaryotic Genome Control (EGC) computational pipeline (see methods) using the Annotation Station graphical user interface.

In terms of correctly aligned RI pairs, our multi-view alignment reaches a 99.7% performance.

In such unconstrained (unchained) condition the pairwise alignment cannot perform correctly (in fact only about half of the total RI pairs were correctly aligned along the alternative paths) while the multi-view alignment still performs correctly.

As shown in Figure  1, PeanutDB web interfaces can be essentially categorized into three types: data grid views, sequence view and alignment view.

Figure 8 Block diagram representing the multi-view alignment system.

In this paper we present the proposed solutions in two main parts: pairwise alignment (Section "Pairwise alignment technique'') and multi-view alignment (Section "Multi-view alignment pipeline").

Table 2 Experimental results summary         Pairwise alignment Multi-view alignment Dataset Number of RI pairs Avg.

We will see that effective multi-view alignment solutions can be designed starting from an efficient pairwise alignment technique.