Sentence examples for view of pathways from inspiring English sources

In such cases, a-priori localization data is not available for any enzyme in a certain pathway, and hence pathway enrichment-based methods are bound to fail, requiring a network-based view of pathways connectivity.

To obtain a more detailed view of pathways affected by the SCS-BTA18-QTL alleles, all of the significantly co-expressed genes were included in the Ingenuity Pathway Analysis for a biological interpretation of the data.

Using the top KEGG pathways inferred by GAGE [ 18], gene expression data and connections between pathways from LinkDB module of KEGG databases [ 24], we created an integrated dynamic network view of pathways in Figure 4.

The study does not reflect the experience of the sickest MDR-TB patients (those in hospital or still smear positive), those not initiating MDR-TB treatment and those who were lost to follow-up, and may therefore present a more optimistic view of pathways to care.

Graphviz view provides better control of node and edge attributes, better view of pathway topology and better understanding of the pathway analysis statistics.

Indeed, this also allowed us to conduct hierarchical analysis to provide a holistic view of pathway interactions and their association with prognosis.

Gene-based analysis has the advantage of whole genome exploration [ 2- 4] whereas proteomic approaches are applicable on small pathways but with a more reliable view of pathway function, since proteins are the ultimate reporters of cellular activity [ 5, 6].

To generate further insight view of pathway perturbation in PA64S (S) under long day length and high temperature conditions, we performed KEGG pathway analysis of the differentially methylated genes.

Because one type of data alone may provide an incomplete view of pathway activity - and due to the availability of multi-omic data from projects such as The Cancer Genome Atlas (TCGA) [ 5] - there is a need to develop methods capable of analyzing multiple types of omic data and thus to provide a more comprehensive view of cancer at the pathway level.

The pathway pages provide options to display only the experimentally determined protein-enzyme activities and zoom-in (molecular structures of the compounds) and zoom-out (pathway overview) views of pathways and the option to compare similar pathways from other species.

The approach is related to the views of pathways, interaction and functional relationship that can be derived from analysis of introduced genetic variation in yeast [ 67].