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The β-lactam resistance was detected via sequence alignment of the K. pneumoniae 342 genome with the designed probes.
Corpet, F. Multiple sequence alignment with hierarchical clustering.
Faster and More Accurate Sequence Alignment with SNAP.
Edgar, R. C. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
Edgar, R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
The nucleotide sequences were determined using an Applied Biosystems 3730 xl DNA Analyzer (Applied Biosystems, Foster City, CA, USA), and SNPs were found via sequence alignments constructed and searched with GENETYX-MAC version 12.00 software (Whitehead Institute for Biomedical Research, Cambridge, MA, USA).
Most methods used sequence alignments with an underlying hypothesis that sequence similarity is correlated with functional similarity.
Multiple sequence alignment of LhSorP5CS with P5CSs from other plants.
(B ) Sequence alignment of BmrD with TM288.
(A ) Sequence alignment of BmrC with TM287.
Traditionally, ordered matchings are implemented via reduction to sequence alignment [ 7, 26, 38].
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