As observed, WSCOVER can perform both composition and verification at the same time and on-the-fly.
ICA was also performed on the verification data using the same parameter setting as on the saliva data.
Meanwhile, our approach combines composition and verification at the same time.
These were repeated for verification with the same result.
Of them, 15 genes (Additional file 2: Table S5) were randomly selected for verification by qRT-PCR 1) on the same sample set as the RNA-Seq, and 2) on another 'validation' set that contained fruits stored for various periods at different CA conditions to test their broader potential.
For verification, the same functional analysis was done on Human and Mouse orthologs (provided by Affymetrix 29/07/04), using the EXPANDER software suite [ 72].
For verification, the same analysis was repeated for the 5S rRNA and the mtrB gene.
The PCR cycles, DNA quantification, transformation and mutation verification were essentially the same as described above.
We introduced verification bias to the same simulated data set 4 more times.
During the verification process, all the witness nodes are either on the same xα-axis or the same yα-axis within the cell.
