Sentence examples for various sequencing platforms from inspiring English sources

The formats of RNA-seq data generated by various sequencing platforms are different [ 74].

Various sequencing platforms (e.g., Roche 454, Solexa/Illumina, ABI SOLiD, etc).

It supports input from various sequencing platforms and exposes all available parameters for customized usage.

ClinLabGeneticist supports analysis of variants generated using various sequencing platforms including Ion Torrent, Agilent, Nimblegen, and others.

This technique is cost and time-effective, provides information on clonal heterogeneity and is adaptable for use on various sequencing platforms.

Sequencing data from different sample preparation protocols and various sequencing platforms with variable read lengths and sequencing coverage are often handled with different analysis tools and parameters.

In the present study, we investigate the ability of various sequencing Platform – Assembler – Depth (PAD) combinations to reconstruct the genomes from a high-throughput in silico simulated virome, and explore how genome relatedness impacts the success of genome reconstruction.

The analysis includes a total of

Taken together, the results demonstrated the applicability of our empirical method for transcript border analysis on directional RNA-seq data of various bacterial species, from different sequencing platforms, and with more or few replicates.

With various kinds of high-throughput sequencing platforms applied to analyze the genome-wide expression of miRNA genes these years, aberrant expression profiles of miRNAs either downregulated or upregulated have been discovered in a broad variety of human malignant cancers, including lymphoma [ 26], breast cancer [ 27], colorectal cancer [ 28], prostate cancer [ 29], and glioma [ 30].

Several groups have applied NGS technologies to genotype the highly polymorphic HLA genes using various amplification and library preparation strategies, sequencing platforms, and sequence analysis approaches to greatly enhance sequencing coverage depth and resolve ambiguities [ 7– 14].