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Further, the membership coefficients for the most optimal number of clusters based on this analysis were permuted using the Greedy algorithm to match the various replicates for that value of k as closely as possible using CLUMPP software (Jakobsson and Rosenberg 2007).
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The LR distribution in six replicates follows a normal distribution with a mean LR for six replicates of ~0.01 ± 0.22 and, as expected, the mean and standard deviation of the various replicates were uniform regardless of the strain used.
Signal from various replicates was averaged when necessary.
An N-factorial experiment examines replicates for various macro- and microscopic measures of strain delocalization and regression analysis is used to identify statistically significant trends in the data.
Figures 1– 3 show the results (boxplots of the individual parameter estimates, the sum of the estimated standard errors for all parameters and the power for testing various hypotheses) evaluated over 500 simulation replicates for scenarios C, E, and F. In scenario C, the risk of disease depends on the maternal and child genotypes but there are no imprinting or interaction effects.
Biological replicates for the fungal-brain interaction samples and the various controls (see Methods section) were run together in a randomized order.
Biological replicates for each measured parameter (number of replicates displayed in table and figure legends) were sampled from various pots of the same conditions to avoid within pot correlation [ 76].
AIDS survives and replicates for years.
RNA was collected from the roots, stems, leaves and various reproductive organs of TM-1 and Hai7124 plants (details in Supplementary Table 47) and subjected to transcriptome sequencing, which yielded on average 25,530,023 reads for each replicate (three replicates for each sample) (Supplementary Table 47).
There were 100 replicates for this strategy.
There were three replicates for each sample.
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