Exact(2)
In this study, we found that SOX2 mRNA was largely higher in lung SCCs relative to adenocarcinomas from various microarray datasets.
We analyzed various microarray datasets from different organisms and different microarray platforms (cDNA, Affymetrix).
Similar(6)
We found that SOX2 mRNA levels are significantly higher in lung SCCs relative to adenocarcinomas or large-cell lung carcinomas from various published microarray datasets.
Taken together, these additional analyses of various public microarray datasets indicate that the prognostic value of ICS extends beyond node-negative and chemotherapy naïve HRneg/Tneg cases, to those of more advanced clinical stage and despite intervention with aggressive adjuvant chemotherapy.
Various microarray gene expression datasets based studies have generated gene signatures to predict the prognosis outcomes, while ignoring the large amount of information contained in established clinical markers.
Thousand fifty-three Affymetrix U133A CEL files from various publicly available microarray datasets (GSE17705 [MDACC298] [ 15], GSE6532 [LOI327] [ 16, 17], GSE12093 [ZHANG18]] [ 18], GSE1456 [PAWITAN19]] [ 19] and MDACC133 [ 20]) were processed using MAS 5.0 (R/Bioconductor) to generate probe-level intensities with a median array intensity of 600, and each expression value was log2 transformed.
Several different microarray datasets were used.
This resource can be utilized to interrogate existing microarray datasets for various lncRNA studies.
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