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Several snapshots were extracted from the trajectory to represent the various conformations for an Elk-1 ETS monomer.
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Likewise, we observed that molecular docking generated moderate docking scores in general for the various conformations of kinases in each state (Additional file 1: Table S4, Figure S2).
The νOH stretching vibrations for the various conformations of a given compound in series c are computed at closer wavenumbers than in series a and b (from 3612 to 3637 cm−1 instead of 3606 to 3648 cm−1).
Up to three palmitate groups can be found on GPCRs and different palmitoylation profiles can result in various conformations of the carboxy-terminal tail, which may select for certain G protein interactions [ 7].
Figure 1: Tomogram of one of various conformations of IgG in solution.
Fig. 28 Schematic illustrations of various conformations of the fusion proteins.
The overall fold of FtsY observed for the various conformations, are nearly identical.
Lamarckian Genetic Algorithm (LGA) docking was run for 100 trials of 25 million energy evaluations each and a histogram of the binding energies for the various conformations was calculated [19].
Thus, the protein can adopt various conformations in solution, consistent with the flexibility observed for many stacked helical domains.
All groups involved agree that PrP has a remarkable good affinity for Aβ peptides tested in various conformations (Balducci et al, 2010; Calella et al, 2010; Lauren et al, 2009).
The relationship between these various conformations is poorly understood.
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