Sentence examples for various binding modes from inspiring English sources

It is likely that SH3 domain-peptides complexes bind together in various binding modes.

In addition, the various binding modes of RmMan134A M5 indicated that subsites −2 to +2 are indispensable during the hydrolytic process.

This chapter surveys the various binding modes and the resulting structures that have been observed for the large number of different carboxylate ligands, which have been used in this chemistry.

The free energy barrier between various binding modes are effectively reduced by the downward swinging of the Glu side groups at the site SHFS, a phenomenon that was neglected in previous simulations with a large negative internal voltage applied across the membrane (Stock et al., 2013; Ulmschneider et al., 2013).

Various binding modes requiring different DBDs in the trimeric RPA have been presented [ 3, 22– 25].

The result is a high-quality assay with Z′ factors around 0.8, which is suitable for semi-quantitative affinity measurements and applicable to various binding modes.

These results reveal the various substrate binding modes that must occur during the catalytic cycle, and it is the mimicking of these binding modes that can be used by inhibitors to prevent the dehydration reaction.

Thermodynamic considerations established that the dyes utilized the various forms of binding modes; hydrogen bonding, hydrophobic bonding, van der Waals and AZ-03 was particularly involved in electrostatic interactions giving positive entropy change for a small enthalpy change.

For a set of different ligands, these solutions are ranked according to the internal similarity consistence among the various ligands in the binding modes obtained from docking.

In this Perspective, we discuss the binding modes of various HDAC inhibitors and highlight topological differences between enzymes as well as key, functionally important, features.

Our results demonstrate that (i) the energetic of the key water molecule are more favorable for the binding site in the Cathepsin B protein (ii) Water bridging and triangle formation were seen between the key amino acid residue and the ligand (iii) The internal energy is significant factor for the binding modes of various ligands.