Sentence examples for various alignment algorithms from inspiring English sources

To evaluate the sensitivity and accuracy of the various alignment algorithms, we simulated from the human genome various 50 base-pair read classes.

By substituting different algorithms for establishing homology (e.g. various alignment algorithms, k-mer spectrum methods, etc)., different sensitivity and specificity might be achieved.

However, this paper makes multiple very strong claims about the superiority of various alignment algorithms based on highly flawed computational experiments.

Tentacle can use several alignment algorithms.

The evaluation results are summarized in Table 1, 2, and 3, which show the average CN, SPE, and MNE of various network alignment algorithms.

Various local and global network alignment algorithms have been proposed, including NetworkBLAST, 96 PINALOG, 97 IsoRankN, 98 and the Narayanan Karp 99 and Hodgkinson Karp 100 algorithms.

Secondly, structural homology to previously defined protein folds in Protein Data Bank (PDB) [ 51] or Pfam [ 19, 20] were searched for using a newly improved version of the meta-predictor, Meta-BASIC [ 52], which combines sequence profile, secondary structure, and prediction of the burial states of individual amino acid with various scoring systems and meta profile alignment algorithms.

This section illustrates the MP-Align alignment algorithm.

An important question is the choice of scores, as any particular score assignment defines the algorithm's preferences in shaping various alignment details such splicing signals or micro-exons.

There are several software programs with their own alignment algorithms.

In the present study I used several simulations to assess how various permutations of the alignment algorithm effect alignment quality and speed.