Exact(1)
Processing of Illumina reads, mapping and variation detection was performed using the CLC Genomics Workbench 5 (version 5.5.1).
Similar(7)
Comprehensive whole-genome structural variation detection is challenging with current approaches.
PCR duplication reads during sequencing, which affect the sequencing depth and variation detection, were excluded by an in-house script.
In the future whole genome sequencing, which avoids any capture phase, has more even coverage and is better suited for copy number variation detection, is likely to supersede any form of sequencing with capture (targeted or exome).
Copy number variations detection is by CNV-seq [ 59] which is based on a robust statistical model with 50× high-quality reads from Illumina HiSeq 2000.
A comparable level of day-to-day variation in detection was observed in LM diagnosis.
Thus, intraindividual variation in NuMt detection was observed and unlike the case of proboscideans, blood did not yield fewer NuMts than hair [ 7].
However, in the case of short-term missing of small aftershocks, the variation of detection is usually unknown.
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