The lists of genes associated with the six cross-validated structural variation categories were investigated for enrichment within Pfam-predicted protein classes (Finn et al. 2010).
Cloning and sequencing of PCR amplicons from protein-coding genes derived from white clover and the diploid taxa has permitted resolution of homologous, homoeologous and paralogous sequence variation categories, and revealed high levels of sequence similarity (c. 95%) between the two sub-genomes.
In addition, comments in Figure 1 provide an overview about taxonomic entities with unique evolutionary changes (categories 2, 3), and with ITS2 length variations (categories 5, 6).
Variations that results in a different amino acid belong to the non-synonymous single-nucleotide variation (nsSNV) category.
We assessed similarities and differences between participants, examining categories that emerged, ranges of variation within categories, and variables that may be involved.
The perennials Boschniakia and Cistanche have lower ds than their sister taxa, which also supports the generation time hypothesis, but there is as much variation among categories (perennial, annual) as between categories.
All of these vocal cues potentially provide useful information to the receiver whenever variation between categories is larger than the within-category variation.
Variable nucleotide maps of the Group variation within Categories are contained in Additional file 4.> -wrap-foot>> -wrap-foot> a blp Categories are numbered.
We see variation across categories with high levels of creativity.
Variation among categories is more pronounced than variation among regions, especially when the most spatially specific subcategories are isolated and considered.
