Sentence examples for variants and insertions from inspiring English sources

Validation studies across 190 dried blood spots demonstrated 100% sensitivity and a positive predictive value of 100% for single-nucleotide variants and insertions and deletions and complete concordance across the polymorphic poly-TG and consecutive poly-T tracts.

We used a number of approaches to search for structural variants and insertion of novel genetic material in these genomes.

The analysis of human genome next-generation sequencing (NGS) data largely focuses on the detection of single nucleotide variants (SNVs), and insertions and deletions of a few base pairs (indels).

The number of genomic variants, SNPs, and insertions or deletions (INDELs), varied greatly among the animals studied, ranging from 3.10 million in one Large White pig to 5.77 million in one British Saddleback pig.

Although highly accurate for the detection of single-nucleotide variants and small insertions or deletions, this approach is expensive, labor intensive and unable to detect large-scale insertions or deletions.

Single nucleotide variants and small insertions and deletions were called using the CLC Genomics workbench.

In addition minority variants and InDels (insertions and deletions) were also investigated, but no additional variants could be detected.

We identified single nucleotide variants and small insertions and deletions (indels) with the Genome Analysis Toolkit (GATK) HaplotypeCaller [ 16].

The programs we developed will enable these groups to process DNA-seq data and identify single-nucleotide variants and small insertions and deletions (indels).

Single nucleotide variants and small insertions and deletions were called using the quality-based variant calling and subsequently annotated prior to exporting the resulting variant lists for filtering.

The GATK UnifiedGenotyper was used with the genotype mode (-gt_mode) flag set to DISCOVERY, and the likelihood model (-glm) flag was set to BOTH in order to identify both single nucleotide variants, and small insertions and deletions.