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In a small number of cases, multiple variants affect a single position, in which case we use the most proximal deletion and ignore any other variants overlapped by that deletion.
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Palla, L. & Dudbridge, F. A fast method that uses polygenic scores to estimate the variance explained by genome-wide marker panels and the proportion of variants affecting a trait.
These variants affected a total of 963 individuals giving a genotype prevalence of 1 7 (963:6334).
These variants affected a total of 1474 individuals, which is equivalent to a HCM genotype prevalence of 1 4 (1474:5810).
The effect of each point variant on kcat/ KM CTAD) was nearly identical to their effect on kcat, indicating that the variants affected a step that was separate from CTAD binding.
In just the last few years, GWAS have been used to identify hundreds of variants affecting a diverse range of common diseases and disease associated quantitative traits (for a summary, see http://www.genome.gov/gwastudies/).gov/gwastudies/
Recently, a study of 48 small intestine neuroendocrine tumors by parallel exome sequencing indicated that somatic single nucleotide variants affected a preponderance of cancer genes, including FGFR2, MEN1, HOOK3, EZH2, MLF1, CARD11, VHL, NONO and SMAD1[ 24].
Our results show that among all the sequences mapping onto miR-101, 5'-trimming variants affecting a single nucleotide position are highly abundant in human samples and show variable expression depending on the sample.
Tchatchou, S. et al. A variant affecting a putative miRNA target site in estrogen receptor (ESR) 1 is associated with breast cancer risk in premenopausal women.
By contrast, Kv7.2 subunits carrying a different EE-associated variant affecting a pore residue (A294V) failed to localize at the AIS, as previously described39 (Fig. 7). Figure 7: AIS localization of Kv7.2 R325G subunits.
The c.2229C>T variant affects a CpG dinucleotide, which are known to have a relatively high mutation rate in mammals.
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