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The tree was constructed based on the ward's minimum variance distance (MSw: mean squared distance within).
So we took the soil variance distance scale as the critical distance value in Getis's statistics, and found a similar zonal distribution of birth defects hotspots.
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The comprehensive overview of the data sets is shown in Additional file 9. Clustering the metagenomes was carried out with unscaled Manhattan variance distances and presented through a double hierarchical dendrogram.
Phylogenetic level and the metabolic level clustering of forty-eight individual metagenomes were carried out with unscaled Bay Curtis variance distances and presented through a double hierarchical dendrogram (Supplementary Figure 4).
A compromise between the two is the minimum-variance distance, or ward distance [22].
We quantify the mean and within-individual temporal variance of distance travelled, distance from bottom and angular velocity using video-tracking, and establish temporal trajectories of ethanol induced behavioural changes in zebrafish.
The adonis function is an analysis of variance with distance matrices using permutations that partitions distance matrices among sources of variation; in this case treatments.
Residuals of raw VCSN estimates tended to have a higher variance with distance, but not those of adjusted estimates nor did NIWA estimates vary with distance.
In our data this is reflected by a larger mean and variance of distance to the closest coding region (Figure 4), and also in a stronger negative correlation between sample frequency and distance to coding regions, for deletions than for insertions (Table 7).
It is worth noting that the relationship between the noise variance and distance depends on the environment size and complexity.
Two groups show a gradual increase of variance with distance and contain respectively clay/feldspar related elements and heavy rare earth related elements.
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