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This produces variable modifications of nanopore surface properties.
Carbamidomethyl (Cys) and oxidation (Met) were specified as variable modifications.
Variable modifications were considered carbamidomethyl and/or oxidation (Table 2).
Carbamidomethylation of cysteine and oxidation of methionine were set as variable modifications.
Oxidation of methionine (+16) and the iodoacetamide derivative of cysteine (+57) were specified as variable modifications.
Deamidation of N and Q, and methione oxidation were allowed as variable modifications.
Two missed cleavages and oxidation and carbamylation as variable modifications were allowed for in the search.
Cysteine carbamidomethyl modification and oxidized methionine were chosen as the variable modifications.
Searches did not take into account any fixed or variable modifications.
Iodoacetamide derivative of cysteine and oxidation of methionine were specified as fixed and variable modifications, respectively.
The fixed and variable modifications were set to Carbamidomethyl (C) and oxidation (M) respectively.
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