An important concern in the validation of RNA alignment programs is the confounding factor that unless cross-validation is properly performed, the performance that one sees on any given validation set is not likely to be a reliable judge of the program's performance on future data.
Manual validation of the alignments was completed with the same 300 loblolly pine amplicons.
Ideally, mapping time is largely spent on the matching and validation of true alignments, but if the seed weight is insufficient, the examination of random hits will dominate the running time.
This paper describes the design, implementation, performance, and validation of the local alignment procedure used to determine the relative positions and orientations of the 340 SVT wafers.
However, results presented on the validation of the EPG alignment and on the topic segmentation tasks indicate that speech is a valuable source of information to process in spite of transcription errors.
This paper presents the design, implementation and validation of the software alignment procedure used to perform geometric calibration of the electromagnetic calorimeter with respect to the tracking system of the SND detector which is taking data at the VEPP-2000 e+e− collider (BINP, Novosibirsk).
Processing using PASA [ 17] software resulted in the validation of 1,147,865 ESTs alignment.
For validation of the linear alignment, Eq. 4 was first applied to data generated from two different IMS obtained from the analyses of a reference mixture of eight analytes (see Tables 2 and 3) in the permeation tube set-up.
To complete the validation of MP-Align, an attempt was made to compare it to the SubMAP alignment tool [ 18]a.
> -wrap-foot> The first systematic validation of a multiple sequence alignment using reference alignments was carried out by McClure (1994).
The precision of the W7 coordinates was quantified by calculating the mean square deviation from the lowest-energy cross-validation trial (after alignment of the protein backbone atoms).
