Sentence examples for validated transcript from inspiring English sources
Validated transcript models from the mm9 genome assembly are depicted below.
The predicted protein sequence described in our study is translated from the validated transcript of Adamts16.
Saxanov et al. used promoter regions of validated transcript annotations in human genome build 16 (July 2003) (Pruitt et al., 2007).
We analyzed all 1,497,869 HapMap intronic SNPs with all experimentally validated transcripts and 31% of them fell into the first intron.
Fourth, we focused on the biologically validated transcripts from the RefSeq database and removed the transcripts from the UniGene and Gnomon databases whose target genes were obtained from using algorithm predictions.
Our results indicate that protein profiling provides a valuable tool for validating transcript profiles in studies of adaptive divergence.
These purine pathway genes are excellent marker genes for validating transcript profiling data involving nodule-specific or nodule-preferential gene expression.
To validate transcript clusters mapping outside annotated genes and promoters, we used data from two independent studies that identified promoters for miRNA transcripts [ 38] and long, intergenic, noncoding RNA (lincRNA) transcripts [ 39].
Further studies using novel technologies, such as next generation sequencing (RNA-seq), association mapping, or the combination of both, will help elucidating and validating transcript abundance divergence with a greater resolution within A. thaliana species.
Instances of transcripts susceptible to NMD can be seen even with annotated protein isoforms – the corresponding values in the case of annotated protein isoforms are 7.9% – suggesting that the observed orphan isoforms are particularly not artifacts due to lack in validating transcript data for NMD.
While this approach only validates transcripts with observable homology to genes in known subsystems, it still shows that the metatranscriptome functional profile does not significantly differ from that of the metagenome (one-way Anosim R = 0.271, p = >0.05).
