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However, the GiGi-MR server stores the address of all mappers that returned valid map results.
However, the VMR server stores the addresses of all mappers that returned valid map results.
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All multi-mapped reads contributions to FPKM values are equally distributed across all valid mapping sites (i.e. if a single read maps to 10 sites, then each sites is awards 1/10th of that read to its total read count).
Consider the valid mapping options shown in Figure7 for the running medical workflow example.
For a mapping of node i to atom j, all adjacent nodes x must have at least one valid mapping y.
For a valid mapping, every neighbor node must have a compatible atom as illustrated in Figure 3. Otherwise, the mapping is invalid which is marked by setting the corresponding matrix entry to zero.
Clearly, ℱ′ must be a valid mapping.
Consider any valid mapping ℱ :∪ G ∈?? V(G)→ V(S).
▪ Let ℱ: ∪ G ∈?? V(G)→ V(S) be any valid mapping.
[Δ opt ] Δ opt =min{Δ :ℱ is any valid mapping}.
First, a valid mapping ℱ :∪ G ∈?? V(G)→ V(S) is initialized such that ℱ =ℱℳ.
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