Sentence examples for valid hits from inspiring English sources

Only the proteins represented by at least two peptide counts and 5% amino acid coverage were considered as valid hits.

Redox processes Thioredoxin reductase 1 (TRXR1), cytoplasmic isoform 1 NP_003321 551 60,288     Thioredoxin reductase 1 (TRXR1), cytoplasmic isoform 3 NP_001087240 649 70,775     aThe proteins represented by at least two peptide counts and 5% amino acid coverage were considered only as valid hits and determined by protein score confidence index (C.I).

However, end-to-end recall decreased substantially, from 78.8 to 71.4% because of removal of a number of valid HITs.

BLAST analyses of these BES produced 38,469 valid hits, of which 27,676 correspond to known or predicted human genes and 10,793 are located outside genes.

Valid hits, i.e., those recognized by the CM, are extended by 150 nt and 300 nt at 5' and 3' ends, respectively, and fed to the CM in global alignment to produce better estimates of the ends.

Even at about 4.81% (the lower percentage determined from random samples having valid hits), this translates into a non-trivial number of protein sequences in NR receiving valuable annotation that is currently not seen in pre-computed results or in CD searches run at the default E-value threshold of 0.01.

If no valid hit was produced by the "selective" model, the corresponding "DM general" is applied.

A valid hit counted as the one with a minimum of 80 nt matches in the alignment.

Techniques for combining the multiple wireless data streams and discriminating valid scoring hits from non-scoring hits, such as blocked hits, are presented and discussed.

Manual identification of single-hits with information-rich peptides might thus help to reduce protein FDRs, while retaining valid single hits (Grobei et al. 2009).

Thus, even some valid glycopeptide hits displayed expectation values as high as 0.4 (Darula and Medzihradszky 2009).