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Custom software, programmed in C, utilizing functions from the VisionShell library, was used for stimulus presentation.
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Other studies generated co-expression data from microarrays and then utilized function specific cis-elements (obtained from multiple sequence alignments on promoter regions of co-expressed genes) to reconstruct regulatory network, assuming that co-expressed genes are co-regulated by the same TFs [ 31].
For instance, here is an example utilizing the functions above that requires both addition and subtraction.
Mitsubishi Corp. engages in the provision of services utilizing the function of general trading.
The dependence is modeled utilizing copula functions.
The technology utilizes cells derived from the cochlea of mice.
This software package utilizes information derived from the literature to identify functional relationships between genes and various biological processes and molecular functions.
We then utilized an ERKO animal model that allows dissociation of ER-mediated function from the effects of estradiol metabolites, and demonstrated formation of genotoxic estradiol metabolites.
The other scoring function utilizing the peptide length information is the K-score.
The PCA for each database was performed using an in house written Java program utilizing some of the available mathematical functions from JSci (A science API for Java: http://jsci.sourceforge.net/).net/
Shiny applications are built using two R scripts that communicate with each other: a user-interface script (ui.R), which controls layout and appearance; and a server script (server.R), incorporating instructions for user-input, processing data, and output by utilizing the R language and functions from user-installed packages.
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