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Alternative screens have utilized expression profiles or 2D-gel electrophoresis combined with sequencing to directly identify proteins expressed or secreted in specific tissues.
As expected, the level of ribosomal biogenesis gene expression was also correlated with the efficiency by which the corresponding carbon is utilized: expression was high in cells grown in a fermentable carbon source (glucose), whereas low expression was observed during growth in non-fermentable carbon sources such as ethanol.
These studies, however, utilized expression microarrays, which provide limited transcriptomic data.
We utilized expression data generated for 3,281 of the predicted 3805 C. parvum genes (data from [ 25]).
Many of these studies have utilized expression of a naturally occurring splice variant of FAK, FAK-Related Non-Kinase (FRNK).
We utilized expression of PAX6 and SOX2 as fate-specification transcription factors to further delineate different glial lineage and differentiation pathways.
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Utilizing expression data from primary glial tumors, we confirmed that WEE1 is strongly over-expressed in gliomas compared to non-tumor control cases (Fig. 4A).
By utilizing expression data, potential target genes of more than 600 active enhancers were identified.
Thus, we need the co-training procedure which can also utilize expression values.
graCNV utilizes expression arrays for CNV measurements and therefore the same microarray can be used for analysis of gene expression.
This is an important characteristic of tests which utilize expression of reference genes to normalize expression of the test genes [ 12].
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