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The two docking algorithms, Ligandfit and GOLD were utilized and compared.
To perform classification analysis, two different classification techniques i.e., linear discriminant analysis (LDA) and multi-class support vector machines (SVM) were utilized and compared.
For modelling interface regions, two approaches named as non-bonded interactions and perfect bonding model are utilized and compared against each other.
In this work three methods to estimate the mass transfer coefficient are utilized and compared: the Sherwood correlation, the Stagnant Film Model (SFM) and the Osmotic Pressure Model (OPM).
As the substitution models used sequence data from a total of 18 species, the HKY85 (Hasegawa, Kishino and Yano 1985) and GTR (general time-reversible) substitution models were utilized and compared (Table 2).
In this case animal model data for specific cellular responses and functional processes can be utilized and compared with marker expression in samples of hippocampal and cortical human brain tissue obtained from nondemented (ND) controls and AD individuals.
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Since landscapes are complex environmental goods, we utilize and compare a multiple contingent valuation (CV) approach with the stated preference approach of contingent ranking.
This ability to directly utilize and compare multiple optimization packages on the same problem is provided by the NLopt package, written by Prof. Steven G. Johnson and freely available at http://ab-initio.mit.edu/nlopt.edu/nlopt
Several common used force schemes are utilized and results compared.
Nonfunctionalization is defined by b = 0, d > 10; dosage balance by b < 0, 0 < c < 1, d = − f, λ(t 0.02 < 0.1; neofunctionalization by b > 0, 0 < c < 1, d > 0, f > 0; and subfunctionalization by b > 0, c > 1, d > 0, f > 0. Models have different numbers of parameters utilized and are compared by their likelihoods and Akaike information criterion (AIC) values.
A systematic analysis of AA events in higher plants will be necessary to identify how these closely spaced alternate acceptors are utilized and to compare the results with those from mammalian systems.
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