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Instead, we utilized a consensus sequence for YH from Beijing Genomics Institute that was based on the UCSC build hg18 (NCBI v36) and is available as a single scaffold spanning chromosome 1 on the project web site (http://yh.genomics.org.cn).org.cn
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Accordingly, a novel subgenomic HCV replicon chimera was created by utilizing a GT1b backbone modified to produce NS5A and NS5B proteins from a consensus sequence generated from HCV GT3a genomic sequences deposited online at the European Hepatitis C Virus database.
Therefore, while the novel iteration approach enabled the generation of a consensus sequence from >10 million short reads, we will explore this method in depth in future studies to fully utilize the potential of Illumina sequencing for studying viruses.
Here, we present and validate a consensus sequence for artificial HEAT repeat proteins.
A consensus sequence for Arc binding identifies several additional partners that include genes implicated in schizophrenia.
was aligned in order to obtain a consensus sequence.
Indeed, it integrates in a consensus sequence CGCGCg.
From these clusters a consensus sequence is derived that maximally covers the fingerprint sequence.
Amplicon Variant Analyzer software was used to align all amplicon sequence reads to a consensus sequence.
A consensus sequence was determined by aligning the six sequences in the Sequencher program.
The reverse compliments of these sequences were then aligned to give a consensus sequence.
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