Sentence examples for using the targetscan algorithm from inspiring English sources

For example, searching for the potential targets of the 52 differentially expressed miRNAs using the TargetScan algorithm led to the identification of 11,031 putative conserved targets.

Using the TargetScan algorithm [20] we selected four high scoring predicted target genes PTEN, SIRT1, SP1 and p300 to examine whether miR-22 affects their expression.

To identify potential targets of (1) the miRNAs that were commonly activated by cardiac atrophy and hypertrophy and of (2) the miRNAs activated only during cardiac atrophy, downstream targets were predicted using the TargetScan algorithm which is based on human miRNA targets [25] [27].

1241 hits were found using the miRanda algorithm [ 54], whereas 353 targets were found using the TargetScan algorithm [ 12].

By the integrated analysis of small RNA-Seq and mRNA-Seq data, we identified 94 mRNAs targeted by 14 age-regulated miRNAs using the TargetScan algorithm.

The putative binding sites for miR-591 within the 3′-UTR of ZEB1, and for miR-106a within 3′-UTRs of caspase-7 or BCL10 were identified using the Targetscan algorithm (targetscan.org).org

We used the TargetScan algorithm [15] for our predictions due in part to our earlier successes in predicting target gene modulation.

To dissect how miR-130a functions downstream of YAP, we used the Targetscan algorithm to predict potential miR-130a targets (Supplementary information, Table S1).

We used the TargetScan algorithm [ 52] to predict binding sites of tgu-miR-2954-3p in chicken genes, and then we confirmed the presence of the same conserved target sequence in the zebra finch genome assembly.

We noticed that Notch 1 has a long evolutionarily conserved 3′-UTR, so we used the TargetScan algorithm [ 15] to search for miRNAs that could potentially regulate Notch 1.

The homeostasis model assessment 1 of insulin resistance (HOMA1-IR) was calculated as previously described [ 15]. miRNA target prediction used the TargetScan algorithm (for a list of predicted miR-221 targets, see www.targetscan.org/cgi-bin/targetscan/vert_61/targetscan.cgi species=Human&gid=&mir_sc=miR-221/222/222ab/1928&mir_c=&mir_nc=&mirg=&sortType=cs&allTxs=&incl_nc=All) [ 16, 17].org/cgi-bin/targetscan/vert_61/targetscan.cgi species=