Sentence examples for using the structure adjacency from inspiring English sources

Time scales relevant to realistic experimental conditions are achieved with an original Monte-Carlo algorithm that enacts rare events in a stochastic manner using the structure adjacency information.

Using the adjacency information of the floorplan, adjacent zones of adjacent walls are identified and connected.

WGCNA uses Pearson correlation to calculate an adjacency matrix using the power adjacency function defined as follows [ 71]: where aij is the adjacency between two genes i and j, x is the expression of a gene, and β is the power factor for a scale-free network.

Next, the Topological Overlap Measure (TOM), representing the overlap in shared neighbors, was calculated using the adjacency matrix.

Compared to a more conventional clustering representation, e.g. adjacency matrix, the speedup of processing time when using the CMLs data structure is profound.

In our applications, we use the unsigned adjacency (Eq. 25) to define gene co-expression networks.

Next, we used the power adjacency function with β = 7 (equation (35)) to construct a weighted gene co-expression network and the signum adjacency function with τ = 0.65 (equation (34)) to construct an unweighted network.

Using the definition of clique adjacency, CPM regards two cliques as being adjacent if they share (k-1) common nodes.

Its simplest type uses the index-free adjacency.

In dimension one, we use the 2-adjacency relation, and in dimension two, we use the 8-adjacency relation.

Figure 6 shows the nonzero structure of the adjacency matrices using the initial vertex ordering compared to the clique ordering approach that orders vertices by the largest clique in which they appear.