Sentence examples for using the solid sequencer from inspiring English sources

To study genome-wide methylation patterns, we developed a method that leverages the selectivity of the MBD with the breadth and flexibility of massively parallel sequencing using the SOLiD sequencer (Fig. 1A).

The presence of polysaccharides in the G. aurea sample did not inhibit enzymatic reactions as DNA isolated by Protocol A was successfully sequenced using the SOLiD sequencer.

We profiled the transcriptome of 24 GBM samples and 4 non-tumor samples using the SOLiD sequencer.

A Barcoded Fragment Library was prepared for each sample and DNA sequencing data were generated using the SOLiD 5500xl sequencers (Life Technologies).

The entire libraries were sequenced using the SOLiD 3 next-generation sequencer (Applied Biosystems).

One mate-pair library (1.5 – 3.5 kb) for each strain was constructed using the SOLiD mate-pair library kit and sequenced on a SOLiD4 Sequencer (Life Technologies).

DNA samples tagged with line-specific index sequences were subjected to sequencing analysis using the 5500xl SOLiD sequencer (Life Technologies) in the paired-end mode (75 + 35 bases) (Table  1).

The nucleotide sequences were determined using the 5500xl SOLiD sequencer (Life Technologies) in the paired-end mode (35 + 75 bases).

Then, we used the shorter reads from the SOLiD sequencer, which allowed us to close gaps and to obtain a higher-quality sequence.

The colorspace reads obtained from the SOLiD sequencer were aligned against the pig reference genome (Sus scrofa build 10.2) using the standard whole transcriptome pipeline and the colorspace alignment tool provided by Applied Biosystems and supplied with the instrument (LifeScope v2.1).

Sequence data obtained with the SOLiD sequencer (3,844,884 reads) were mapped against the previously created consensus using CLC Workbench software.