Sentence examples for using the software suite from inspiring English sources

Data were processed using the software suite Demeter [44].

All preprocessing and analyses were performed using the software suite Analysis of Functional NeuroImages (AFNI)[ 53, 54].

Data analysis was performed using the software suite TopHat and Cufflink with default settings (Trapnell et al, 2012).

MS data were processed using the software suite Max Quant version 1.2.2.9 (Cox and Mann, 2008) and searched using Andromeda search engine (Cox et al., 2011) against a target-decoy A. thaliana database containing 33,351 forward protein sequences, the sequence of the LYS1-GFP fusion protein, and 248 frequently observed protein contaminants.

The data were evaluated using the software suites PASW Statistics 18.0 and Sigmastat (Version 2.0).

Table 4 shows some of these genes, selected using the software Affymetrix Microarray Suite 4.0.

All association analysis was performed using the software SNP and Variation Suite Ver-7 from Golden Helix , Inc

Particles were selected using the software boxer part of the EMAN suite [ 24].

Data were collected on a custom-modified FACSAriaII flow cytometer and analysed with FlowJo software version 9·5.3 (TreeStar Inc .. Graphics were generated using the spice software suite [ 16].

The preprocessing pipeline was performed using the Meshlab software suite.

Scanning data from the Affymetrix GeneChip Command Console were analyzed using the Chromosome Analysis software suite (Affymetrix).