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Multiple mean comparisons using least significant difference were computed using the significance level (p < 0.05).
Significant differentially expressed/translated genes were identified using the Significance Analysis of Microarrays (SAM) algorithm using a q-value threshold of q<0.1 [79].
Using the significance analysis of microarrays method, we observed 20 significant RE-changing miRNAs (miRNAs that show different regulatory effects between IBC and non-IBC).
Genes with significant changes in expression were identified using the significance analysis of microarrays (SAM) test implemented in the MeV software (v4.2) with ∆ = 1.18 for TIGR4 and ∆ = 1.98 for G54 (∆ cutoff corresponded to a false positive rate of 0%).
The identification of genes with significant differences in expression levels was performed using the significance analysis of microarray method (SAM one class) [29].
Using the significance bit stream from the insignificant sorting pass, the refining pass (RP) codes the significant micro blocks and gives the coded output.
By using the significance of goals which determined by opinion of experts, the pair-wise comparison procedure has been done.
Retina-enriched genes were identified by using the significance analysis for microarray (SAM) algorithm.
In the present study, the sample size can reasonably be considered as large and therefore, using the significance tests directly from the software output, may not be justified.
The weight of the vote can be softly adjusted by using the significance of the contrast or the curvature, provided by the gradient magnitude or the Frobenius norm of the Hessian matrix.
Microarray data were also analyzed using the Significance Analysis of Microarrays (SAM) [28].
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