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For problems whose Cholesky Decomposition does not fit into memory we use the Conjugate Gradient Method together with ILUPACK [17] as a preconditioner (using the settings of Section 6.1).
The software assembled a genetic map from the SNP data using the settings of binary model, expectation-maximum algorithm, and 1000 permutations.
The table shows the number of patients indicated with non-monophyletic infection using the settings of both the row and the column header of a cell, from a preliminary analysis of 170 individuals.
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However, for the final analysis presented in this paper, we used the settings of the above procedure as unified as the natural variability of APs in different neurons allowed it.
The experimental results are obtained by using the set of parameter settings summarized in Table 1.
Using the parameter settings of set 6, only 6.9 markers are found on average (in comparison to 18 in set 2).
The strict data model of Unified Medical Language System UMLSS) distribution 2005ac was searched against using the default settings of MMTx with an empirically derived score cutoff value of 700.
The first 1000 SNP of each of the eight replicates of pedigree 1 Ne1000 were also phased using the default settings of fastPHASE [ 4].
Using the default settings of this package, we removed 50% of the genes with lowest interquartile range (IQR).
We observed errors in 10% of the SNPs, when using the standard settings of the Illumina Genome Studio software.
Firstly, we filtered out all transcripts giving low probe set intensity values on the chip using the default settings of the Agilent analysis software package (values < 100).
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