Sentence examples for using the sequest program from inspiring English sources

For protein identification MS/MS data were searched against a user defined amino acid sequence database containing the target sequence using the SEQUEST program operated through the Proteome Discoverer software (Thermo Scientific).

For protein identification, the MS spectra results were searched against the 2 August 2013 release of the C. thermocellum DSM1313 genome available at the NCBI website (NCBI reference sequence NC_017304.1) using the SEQUEST program from the Thermo Discoverer Proteome 1.0 database.

For peptide identifications, the generated MS/MS spectra were evaluated using the SEQUEST analysis program and/or Mascot.

Data were searched against the Danio rerio IPI database v3.45 using the SEQUEST algorithm in the BioWorks software program version 3.3.1 SP1.

The generated MS/MS spectra were searched against the human database using the Sequest search engine in the Proteome Discoverer (Version 1.4) software, with the false discovery rate (FDR) setting to 0.01.

They were searched against databases for protein identification using the Sequest software.

The peak list files generated by the Bioworks software (Applied Biosystems, USA) using the default parameters were searched against databases for protein identification using the Sequest software.

The mass spectrometry data was analyzed and compared using the Sequest software (Bioworks3.31, Thermo) searching the mouse section of the NR-NCBI database.

MS/MS spectra were searched using the Sequest algorithm with serine, threonine, and tyrosine phosphorylation and methionine oxidation as dynamic modifications.

The proteins were identified using the SEQUEST algorithm and Proteome Discoverer (v 1.3, Thermo Scientific).

The CID raw spectra were extracted using Proteome Discoverer 1.4 (Thermo Fisher Scientific) and subjected to database searches using the Sequest algorithm.