As soon as hypotheses are available, they are tracked using the same constraint-based technique.
Simulation was also developed for some existing models using the same constraints.
Then, ASPIDS was simulated using the same constraints as above.
The Bayesian tree was constructed using the same constraints as the maximum-likelihood tree (LG substitution model, four gamma categories), with two chains that had the first 5,000 trees discarded as burn-in, and the next 20,000 trees sampled at every 10th tree (2,000 trees total per chain).
The Bayesian tree was constructed using the same constraints as the maximum-likelihood tree (WAG substitution model, four gamma categories), with two chains that had the first 20,000 trees discarded as burn-in and the next 80,000 trees sampled at every 10th tree (8,000 trees total per chain).
The analysis we have performed using the same constraints (our unpublished work) shows the frequency of TNR tracts in the genome and reveals that AGG and TGG repeats most frequently form the longest tracts of at least 100 units (300 bp), which may facilitate the NAHR mechanism.
Hipsley et al. [ 42] used the same constraint for the lizard-tuatara split as Wiens et al. [ 41] but the former used a Bayesian probabilistic method as implemented in the TreeTime software [ 184].
The third export scheme uses the same constraints on exporters and importers as in (8), but replaces the first objective by mathrm{objective, 1:} quad minleft(max_{n} frac{B_{n}(t)}{langle{L_{n}}rangle} right) ;. (9).
The unrestrained scenario used the same constraints as the anticipated scenario but placed 260,953 wells in all areas with high oil and gas potential.
To make the allelic QTL (or cofactors) main effects estimable, we used the same constraints as in the QTL analysis for the single populations as well as for the connected analysis.
