In addition, the degree of replicability of research conclusions by other scholars was low, and the conclusions did not facilitate multiangle studies for a specific issue using the same benchmarks as the basis.
As these examples illustrate, studies that provide concentration statistics do not necessarily report them using the same benchmarks (e.g., 5, 10, or 20% of offenders), and it appears that the concentration of crime can vary between studies due to differences in their samples' characteristics.
Using the same benchmark, we calculate a fraction of over 81% for the parasitoid wasp.
Here we asked whether these increases were beneficial for our goal of discovering functional links between genes, using the same benchmark of 52 known pathways and functional systems.
Second, DBD database was based on domain assignments from the SUPERFAMILY and PFAM HMM libraries, and predicted TFs from all eubacteria (including cyanobacteria) and eukaryotic organisms using the same benchmark.
Here, we repeated the same evaluation procedure by using the same benchmark, the protein-protein docking benchmark 2.0 established by the ZDOCK team [ 27], but recollect the homologue set for each query protein from a newer version of sequence databases (Oct . 10 , 2008
In our previous work, we developed the Functional Analysis through Hidden Markov Models (FATHMM) algorithm and, using a model weighted for inherited disease mutations, observed improved performance accuracies over alternative computational prediction methods using the same benchmark (Shihab et al., 2013).
Using the same benchmark dose lower limit and uncertainty factor used by the NRC, Mahaffey et al. (2004) calculated that blood total mercury levels > 3.5 μg/L in mothers could be associated with increased risk to the developing fetal nervous system.
Other reports in recent weeks offered more pessimistic assessments, including one by the Government Accountability Office that used the same benchmarks but found fewer successes to report.
We use the same benchmark package, MPPTEST, with a bisection test consisting of 32-CPU MPI jobs.
Moreover, the existing reviews do not use the same benchmark of instances and the results are difficult to reproduce and generalise.
