Sentence examples for using the sam algorithm from inspiring English sources

Supervised analysis of normalized gene expression data was conducted using the SAM algorithm.

The resulting data were analyzed using the SAM algorithm [7] to identify genes which had changed expression significantly between stages.

In order to identify microRNAs with statistically significant changes in expression between the groups, we performed a supervised analysis using the SAM algorithm.

The data were analyzed using the SAM algorithm [7] with multiple testing correction to identify genes which had statistically significantly changed expression between each stage, and K-means clustering to identify clusters of genes having unique temporal expression profiles.

The false discovery rate (FDR) associated with these genes was 13%, as calculated using the SAM algorithm.

Statistically significant gene expression changes occurring in RasGrf1 KO islets were identified using the SAM algorithm [ 37].

The microarray GSE4757 was analyzed using Significance Analysis of Microarrays (SAM) to identify significantly expressed AD related genes in R using the SAM 5.0 package from [ 40].

However, the problem is diminished when using the SAM analysis technique.

Sex bias analysis was performed using the SAM [ 21], and P < 0.05 represented statistical significance.

To establish whether promoter methylation participated in the regulation of genes differentially expressed in NTERA-2 cells and ASC we analyzed the gene expression using transcriptome data and the SAM algorithm and found that 56% of the hypomethylated genes in ASC (n = 46) were overexpressed in these cells in comparison with NTERA-2, (Table S10 and Figure 4A).

Differentially expressed genes (brain versus bone relapse and brain versus lung relapse) were identified by repeated permutation testing with the SAM algorithm by using a 5% fdr.