Sentence examples for using the quantile normalization from inspiring English sources

To remove systematic biases among the chips, they were normalized using the quantile normalization scheme.

The log2-transformed intensity values were normalized using the quantile normalization method [16] implemented in the affy package.

The microarray data were extracted with Bead Studio 3.6 (Illumina, CA, USA) and normalized using the quantile normalization method in the Linear Models for Microarray Data (LIMMA) package in R language environment [15].

Expression levels were normalized using the quantile normalization method [ 44].

Raw gene expression data were log2-transformed and normalized using the quantile normalization method [ 19].

Probe intensities were normalized using the quantile normalization procedure (Wu et al. 2004).

We used the quantile normalization method (Chudin et al, 2006) for all the analyses reported here.

We normalized the data of Thorgeirsson and colleagues using the quantile-normalization method.

For the normalized test using the quantile-quantile normalization [ 16], the quantiles of the set of measures obtained by each technique are identical.

The normalization method used was the quantile normalization method in the preprocessCore package.

Microarrays normalized data were further exported into the Limma package [33], for inter-array normalization using the quantile method [34].