Sentence examples for using the python module from inspiring English sources

All figures were produced using the Python module Matplotlib [ 72].

These analyses were carried out using the Python module FJOIN (30).

Support vector machine (SVM) models were trained and parameterized using the Python module PyML (http://pyml.sourceforge.net), which contains a set of non-linear kernels specifically developed for training and classification of biological sequences (Ben-Hur et al., 2008).

An unweighted Robinson-Foulds (RF) distance (Robinson and Foulds 1981) was then calculated between each gene tree and the known species tree using the python module dendropy (Sukumaran and Holder 2010).

The method described has been implemented in a computer program called "BayesRate" (available at http://sourceforge.net/projects/bayesrate/ or from the authors) written in Python [ 45] (based on the Numpy [ 46] and Scipy [ 47] libraries) and R [ 48], integrating codes using the Python module rpy2 [ 49].

We used the Python module Graph-Tool3 to build and analyze the network and the Python library Matplotlib4 to produce the plots.

To visualize the mapping results heatmaps were created from the density values using the Python matplotlib module in combination with the jet colormap [ 37].

The ASTI 3 critiquing module was written using the Python programming language.

Database queries are generated using the Python programming language, version 2.6.5, and the PyGreSQL DB-API module.

using the python server above).

The graph representation of the metabolic maps and the BFS trees were generated using the Networkx Python module [ 45] (Fig.  6).