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The linear filters (or equivalently the impulse responses ) have then to be identified, using the previously estimated.
Using the previously estimated mutation rate for Procellariidae of 0.9% per million of years [37], the time of the most recent common ancestor (MRCA) for P. olsoni and P. puffinus was estimated to be 600,000±400,000 years.
The mean background rate was implemented into sequenceLDhot using the previously estimated interval data.
The posterior distribution of s is then inferred for each locus using the previously estimated distribution of N as a prior.
The probability of death estimated from each model was classified using the previously estimated score cut-offs (Additional file 1: Tables S2 and S3).
To assess the statistical significance of Tajima's D, we ran 100,000 coalescent simulations (Hudson 2002) using the previously estimated S statistic.
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In this last paper the authors use the previously estimated free-energy of tubulin/tubulin interaction (in the range of −7 to −9 kT [14] [16]) to predict that at 5 µM tubulin concentration only 5% of the tubulin dimers would be in an oligomeric form, whereas 95% of the tubulin should be in the form of individual dimers [7].
For the SymmeTREE analysis, we therefore used the previously estimated set of 12 fully resolved, most parsimonious trees from the total evidence maximum parsimony analysis that included gaps [ 9].
Loci were partitioned and the previously estimated evolutionary models were used for Bayesian analyses.
The amount of light intercepted daily by leaves in eachMA class was estimated using the previously determined light : MArelationship.
After the dura was opened, the resection area was estimated using the previously implanted subdural electrodes.
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